PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK44871.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 416aa    MW: 45494.4 Da    PI: 5.7833
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK44871.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.64e-31209267259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs+fpr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  KFK44871.1 209 SDLWAWRKYGQKPIKGSPFPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 267
                 699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.1E-31202269IPR003657WRKY domain
PROSITE profilePS5081132.879203269IPR003657WRKY domain
SuperFamilySSF1182903.27E-26206269IPR003657WRKY domain
SMARTSM007746.3E-38208268IPR003657WRKY domain
PfamPF031067.1E-26210267IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MCSVFEVLDE MDSFQGDLTD VVRGIGGHVL SPETSPPTIW PLPPPLPPSD PHINPFGDPF  60
VTMTDPLLQE LNAVTNSGFF PNNTNVNNGF LSHKVFEEDH IKSQCSIFPR IRISHSNIIQ  120
DSSPCNSPAM SARVSAAAAA ASPRGVINVD TNSPRNCLLV DGNTFSSQIQ ISSPRNLGLK  180
RRKSQAKKVV CIPAPAAMNS RSSGEVVPSD LWAWRKYGQK PIKGSPFPRG YYRCSSSKGC  240
SARKQVERSR TDPNMLVITY TSEHNHPWPI QRNALAGSTR SSSSNLTTSS KSSTTNAIAI  300
ASSNPMPSSA TPPPLAASAV KDEQREEDME FENVEEDDHN QIDAYKPELH HHRQPEDNFF  360
ADLEELEGNS LSMLLSRGCA GDREVKTTAT GGISDFFGWS DDNNNNNNND QDLRSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-172102691977Probable WRKY transcription factor 4
2lex_A4e-172102691977Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2283430.0AK228343.1 Arabidopsis thaliana mRNA for putative DNA-binding protein, complete cds, clone: RAFL14-76-G23.
GenBankAY0526460.0AY052646.1 Arabidopsis thaliana WRKY transcription factor 14 (WRKY14) mRNA, complete cds.
GenBankBT0064680.0BT006468.1 Arabidopsis thaliana At1g30650 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_564359.10.0putative WRKY transcription factor 14
SwissprotQ9SA800.0WRK14_ARATH; Probable WRKY transcription factor 14
TrEMBLA0A087HRW90.0A0A087HRW9_ARAAL; Uncharacterized protein
STRINGAT1G30650.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30852865
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.11e-169WRKY DNA-binding protein 14